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Security releases

Samtools

CVE-2026-116742: HTSlib through 1.24 contains a heap out-of-bounds write and read vulnerability in bgzf_index_load_hfile() in bgzf.c that allows attackers to corrupt heap memory

CVE-2026-116742 Oct 26, 2026 Source: Vendor

HTSlib through 1.24 contains a heap out-of-bounds write and read vulnerability in bgzf_index_load_hfile() in bgzf.c that allows attackers to corrupt heap memory by supplying a crafted .gzi index entry count. A count of 0xFFFFFFFF truncates noffs to zero, causing writes past a malloc(0) buffer and an offs[-1] read in bgzf_useek(), resulting in heap corruption or crashes in tools like samtools and bcftools.

Source of record The credited names below are quoted verbatim from the vendor's own advisory: https://nvd.nist.gov/vuln/detail/CVE-2026-116742
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Credited

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CVE-2026-116742 BR2026-0000-033984 unclaimed
Credited as HaiND from the Post and Telecommunication Institute of Technology